Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PCDHA14-201ENST00000506751 2298 ntBASIC13□□□□□ -0.33
TRGV3P03979 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
TRGV3P03979 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 AL139384.1-201ENST00000612143 3047 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV3P03979 AC092919.2-201ENST00000623631 1645 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
TRGV3P03979 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 CD99-202ENST00000381180 530 ntTSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 BX842568.4-201ENST00000421222 227 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV3P03979 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.99□□□□□ -0.33
TRGV3P03979 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.99□□□□□ -0.33
TRGV3P03979 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.99□□□□□ -0.33
TRGV3P03979 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 AL161645.1-201ENST00000622716 1255 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 PCDH8P1-201ENST00000428983 2773 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
TRGV3P03979 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
TRGV3P03979 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 AL512652.2-201ENST00000625156 1716 ntBASIC12.99□□□□□ -0.33
TRGV3P03979 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC12.99□□□□□ -0.33
TRGV3P03979 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC12.99□□□□□ -0.33
TRGV3P03979 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
TRGV3P03979 MIR600HG-201ENST00000449175 5984 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 AC092171.3-201ENST00000610122 2651 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.98□□□□□ -0.33
TRGV3P03979 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
TRGV3P03979 MCCD1P2-201ENST00000423228 335 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 FAM58CP-201ENST00000435741 640 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 AC092865.5-201ENST00000545435 363 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 MIR3687-2-201ENST00000577708 61 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 MIR3687-1-201ENST00000614492 61 ntBASIC12.98□□□□□ -0.33
TRGV3P03979 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
TRGV3P03979 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
TRGV3P03979 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.98□□□□□ -0.33
TRGV3P03979 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms