Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SPDYE21P-201ENST00000413323 827 ntBASIC16.86■□□□□ 0.29
MT-ND3P03897 LINC00982-205ENST00000420957 435 ntBASIC16.86■□□□□ 0.29
MT-ND3P03897 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-ND3P03897 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.86■□□□□ 0.29
MT-ND3P03897 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.86■□□□□ 0.29
MT-ND3P03897 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
MT-ND3P03897 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.86■□□□□ 0.29
MT-ND3P03897 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.86■□□□□ 0.29
MT-ND3P03897 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MT-ND3P03897 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 AC103702.1-201ENST00000548801 2630 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 AC004817.3-201ENST00000602957 2129 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-ND3P03897 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND3P03897 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MT-ND3P03897 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.85■□□□□ 0.29
MT-ND3P03897 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 RPL13AP23-201ENST00000480739 586 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.85■□□□□ 0.29
MT-ND3P03897 OR7E14P-202ENST00000530490 1290 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 AC021087.4-201ENST00000563761 564 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 AC006538.3-201ENST00000612495 578 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 MIR7706-201ENST00000613747 67 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.85■□□□□ 0.29
MT-ND3P03897 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 AC243591.1-201ENST00000452967 1364 ntBASIC16.85■□□□□ 0.29
MT-ND3P03897 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MT-ND3P03897 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.85■□□□□ 0.29
MT-ND3P03897 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MT-ND3P03897 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND3P03897 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MT-ND3P03897 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MT-ND3P03897 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND3P03897 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.84■□□□□ 0.29
MT-ND3P03897 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 SART3-203ENST00000546611 1184 ntBASIC16.84■□□□□ 0.29
MT-ND3P03897 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.84■□□□□ 0.29
MT-ND3P03897 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.84■□□□□ 0.29
MT-ND3P03897 TERC-201ENST00000602385 541 ntBASIC16.84■□□□□ 0.29
MT-ND3P03897 AP000867.4-201ENST00000641616 219 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms