Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
COL4A1P02462 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A1P02462 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A1P02462 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 SUOX-214ENST00000551841 906 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A1P02462 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A1P02462 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 RNF165-205ENST00000588679 2904 ntBASIC19.81■□□□□ 0.76
COL4A1P02462 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 LINC01144-201ENST00000626198 1710 ntBASIC19.81■□□□□ 0.76
COL4A1P02462 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 AC022210.1-201ENST00000449856 793 ntBASIC19.81■□□□□ 0.76
COL4A1P02462 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.81■□□□□ 0.76
COL4A1P02462 RRP7BP-205ENST00000566851 833 ntBASIC19.81■□□□□ 0.76
COL4A1P02462 AC106886.1-201ENST00000568660 600 ntBASIC19.81■□□□□ 0.76
COL4A1P02462 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.81■□□□□ 0.76
COL4A1P02462 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COL4A1P02462 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.81■□□□□ 0.76
COL4A1P02462 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A1P02462 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A1P02462 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A1P02462 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.8■□□□□ 0.76
COL4A1P02462 RPS2P32-201ENST00000439199 892 ntBASIC19.8■□□□□ 0.76
COL4A1P02462 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COL4A1P02462 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.8■□□□□ 0.76
COL4A1P02462 AC245100.5-201ENST00000452108 331 ntBASIC19.8■□□□□ 0.76
COL4A1P02462 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.8■□□□□ 0.76
COL4A1P02462 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 BNIP3P1-202ENST00000550043 1585 ntBASIC19.8■□□□□ 0.76
COL4A1P02462 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
COL4A1P02462 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL4A1P02462 SERF2-217ENST00000630046 862 ntTSL 5 BASIC19.8■□□□□ 0.76
COL4A1P02462 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COL4A1P02462 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL4A1P02462 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
COL4A1P02462 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL4A1P02462 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.79■□□□□ 0.76
COL4A1P02462 AL691432.1-201ENST00000596308 1422 ntBASIC19.79■□□□□ 0.76
COL4A1P02462 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.79■□□□□ 0.76
COL4A1P02462 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A1P02462 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A1P02462 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A1P02462 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 AC106886.4-201ENST00000623557 2502 ntBASIC19.79■□□□□ 0.76
COL4A1P02462 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COL4A1P02462 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.79■□□□□ 0.76
COL4A1P02462 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL4A1P02462 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.79■□□□□ 0.76
COL4A1P02462 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL4A1P02462 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
COL4A1P02462 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC19.79■□□□□ 0.76
COL4A1P02462 AGGF1P2-201ENST00000426656 2106 ntBASIC19.79■□□□□ 0.76
COL4A1P02462 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL4A1P02462 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.78■□□□□ 0.76
COL4A1P02462 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.78■□□□□ 0.76
COL4A1P02462 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
COL4A1P02462 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms