Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 KSR1P1-201ENST00000446298 240 ntBASIC10.74□□□□□ -0.69
TRACP01848 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC10.74□□□□□ -0.69
TRACP01848 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 IGHV3-52-201ENST00000519770 353 ntBASIC10.74□□□□□ -0.69
TRACP01848 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC10.74□□□□□ -0.69
TRACP01848 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 ABBA01031674.1-201ENST00000635145 728 ntBASIC10.74□□□□□ -0.69
TRACP01848 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 AC069224.1-201ENST00000566372 1715 ntBASIC10.74□□□□□ -0.69
TRACP01848 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
TRACP01848 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.74□□□□□ -0.69
TRACP01848 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.74□□□□□ -0.69
TRACP01848 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
TRACP01848 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TRACP01848 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
TRACP01848 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
TRACP01848 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC10.73□□□□□ -0.69
TRACP01848 WWOX-216ENST00000569818 525 ntBASIC10.73□□□□□ -0.69
TRACP01848 MIR4674-201ENST00000582457 87 ntBASIC10.73□□□□□ -0.69
TRACP01848 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC10.73□□□□□ -0.69
TRACP01848 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC10.73□□□□□ -0.69
TRACP01848 AL031985.4-201ENST00000642138 673 ntBASIC10.73□□□□□ -0.69
TRACP01848 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
TRACP01848 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 AC013726.1-201ENST00000563747 2285 ntBASIC10.73□□□□□ -0.69
TRACP01848 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 DMBT1P1-203ENST00000636837 4628 ntBASIC10.73□□□□□ -0.69
TRACP01848 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
TRACP01848 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms