Protein–RNA interactions for Protein: O95859

TSPAN12, Tetraspanin-12, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN12O95859 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TSPAN12O95859 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.08■□□□□ 0.16
TSPAN12O95859 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 LINC02447-202ENST00000501888 2146 ntBASIC16.07■□□□□ 0.16
TSPAN12O95859 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.07■□□□□ 0.16
TSPAN12O95859 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.07■□□□□ 0.16
TSPAN12O95859 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.07■□□□□ 0.16
TSPAN12O95859 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.07■□□□□ 0.16
TSPAN12O95859 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.07■□□□□ 0.16
TSPAN12O95859 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TSPAN12O95859 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.07■□□□□ 0.16
TSPAN12O95859 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.07■□□□□ 0.16
TSPAN12O95859 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TSPAN12O95859 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.06■□□□□ 0.16
TSPAN12O95859 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TSPAN12O95859 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.06■□□□□ 0.16
TSPAN12O95859 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TSPAN12O95859 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 MIR648-201ENST00000385046 94 ntBASIC16.06■□□□□ 0.16
TSPAN12O95859 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 AC002056.1-201ENST00000395613 760 ntBASIC16.06■□□□□ 0.16
TSPAN12O95859 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.06■□□□□ 0.16
TSPAN12O95859 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.06■□□□□ 0.16
TSPAN12O95859 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.06■□□□□ 0.16
TSPAN12O95859 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.06■□□□□ 0.16
TSPAN12O95859 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.06■□□□□ 0.16
TSPAN12O95859 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.06■□□□□ 0.16
TSPAN12O95859 AL161645.1-201ENST00000622716 1255 ntBASIC16.06■□□□□ 0.16
TSPAN12O95859 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TSPAN12O95859 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.06■□□□□ 0.16
TSPAN12O95859 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TSPAN12O95859 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSPAN12O95859 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.05■□□□□ 0.16
TSPAN12O95859 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSPAN12O95859 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
TSPAN12O95859 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TSPAN12O95859 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TSPAN12O95859 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSPAN12O95859 AC132872.4-202ENST00000622924 2756 ntBASIC16.05■□□□□ 0.16
TSPAN12O95859 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TSPAN12O95859 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TSPAN12O95859 AC008677.1-201ENST00000519230 1561 ntBASIC16.05■□□□□ 0.16
TSPAN12O95859 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms