Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX6O95503 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX6O95503 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CBX6O95503 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX6O95503 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CBX6O95503 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX6O95503 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX6O95503 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX6O95503 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX6O95503 AL135999.2-201ENST00000622438 1686 ntBASIC16.5■□□□□ 0.23
CBX6O95503 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.49■□□□□ 0.23
CBX6O95503 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBX6O95503 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBX6O95503 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CBX6O95503 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CBX6O95503 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX6O95503 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 AC132008.2-207ENST00000454517 770 ntBASIC16.49■□□□□ 0.23
CBX6O95503 AC068472.1-201ENST00000474589 881 ntBASIC16.49■□□□□ 0.23
CBX6O95503 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX6O95503 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 AC139887.3-201ENST00000568585 713 ntBASIC16.49■□□□□ 0.23
CBX6O95503 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX6O95503 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.49■□□□□ 0.23
CBX6O95503 AC008608.2-201ENST00000606089 416 ntBASIC16.49■□□□□ 0.23
CBX6O95503 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX6O95503 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 PRAL-201ENST00000624952 3286 ntBASIC16.49■□□□□ 0.23
CBX6O95503 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX6O95503 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 AP005117.1-202ENST00000581724 1908 ntBASIC16.49■□□□□ 0.23
CBX6O95503 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX6O95503 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 MIR940-201ENST00000401276 94 ntBASIC16.48■□□□□ 0.23
CBX6O95503 BX842568.4-201ENST00000421222 227 ntBASIC16.48■□□□□ 0.23
CBX6O95503 AC018712.1-201ENST00000455767 687 ntBASIC16.48■□□□□ 0.23
CBX6O95503 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.48■□□□□ 0.23
CBX6O95503 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.48■□□□□ 0.23
CBX6O95503 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CBX6O95503 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.48■□□□□ 0.23
CBX6O95503 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX6O95503 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX6O95503 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.48■□□□□ 0.23
CBX6O95503 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms