Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC21.42■■□□□ 1.02
LTN1O94822 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 RPF1-202ENST00000370656 724 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC21.42■■□□□ 1.02
LTN1O94822 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC21.42■■□□□ 1.02
LTN1O94822 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC21.42■■□□□ 1.02
LTN1O94822 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.42■■□□□ 1.02
LTN1O94822 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 MIR4525-201ENST00000580000 75 ntBASIC21.42■■□□□ 1.02
LTN1O94822 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
LTN1O94822 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LTN1O94822 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
LTN1O94822 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
LTN1O94822 AC004987.2-201ENST00000395959 1148 ntBASIC21.41■■□□□ 1.02
LTN1O94822 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 RPL28-204ENST00000431533 590 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 FXR1-221ENST00000491674 365 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 AC104596.2-201ENST00000512793 793 ntBASIC21.41■■□□□ 1.02
LTN1O94822 RPL28-206ENST00000558752 671 ntTSL 3 BASIC21.41■■□□□ 1.02
LTN1O94822 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.41■■□□□ 1.02
LTN1O94822 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.41■■□□□ 1.02
LTN1O94822 AC133552.6-201ENST00000613406 534 ntBASIC21.41■■□□□ 1.02
LTN1O94822 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 BNIP3P1-202ENST00000550043 1585 ntBASIC21.41■■□□□ 1.02
LTN1O94822 REXO1L6P-201ENST00000603433 1515 ntBASIC21.41■■□□□ 1.02
LTN1O94822 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LTN1O94822 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 DEK-201ENST00000244776 1441 ntTSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
LTN1O94822 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC21.41■■□□□ 1.02
LTN1O94822 CU634019.7-201ENST00000624153 1185 ntBASIC21.41■■□□□ 1.02
LTN1O94822 FP236241.2-201ENST00000624906 1185 ntBASIC21.41■■□□□ 1.02
LTN1O94822 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LTN1O94822 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC21.4■■□□□ 1.02
LTN1O94822 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LTN1O94822 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LTN1O94822 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.4■■□□□ 1.02
LTN1O94822 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC21.4■■□□□ 1.02
LTN1O94822 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.4■■□□□ 1.02
LTN1O94822 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC21.4■■□□□ 1.02
LTN1O94822 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LTN1O94822 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 AL355994.2-201ENST00000447882 704 ntBASIC21.4■■□□□ 1.02
LTN1O94822 FTH1P14-201ENST00000482930 551 ntBASIC21.4■■□□□ 1.02
LTN1O94822 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC21.4■■□□□ 1.02
LTN1O94822 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.4■■□□□ 1.02
LTN1O94822 AC009053.2-201ENST00000563701 2365 ntBASIC21.4■■□□□ 1.02
LTN1O94822 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.4■■□□□ 1.02
LTN1O94822 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LTN1O94822 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LTN1O94822 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.39■■□□□ 1.02
LTN1O94822 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
LTN1O94822 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC21.39■■□□□ 1.02
LTN1O94822 REXO1L8P-201ENST00000604378 1897 ntBASIC21.39■■□□□ 1.02
LTN1O94822 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LTN1O94822 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC21.39■■□□□ 1.02
LTN1O94822 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC21.39■■□□□ 1.02
LTN1O94822 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.02
LTN1O94822 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
LTN1O94822 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
LTN1O94822 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms