Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 POU5F1P6-201ENST00000466990 990 ntBASIC17.22■□□□□ 0.35
BEST1O76090 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.22■□□□□ 0.35
BEST1O76090 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.22■□□□□ 0.35
BEST1O76090 AC061975.2-201ENST00000581722 295 ntBASIC17.22■□□□□ 0.35
BEST1O76090 AL355385.1-201ENST00000606123 409 ntBASIC17.22■□□□□ 0.35
BEST1O76090 AC003101.2-201ENST00000612557 442 ntBASIC17.22■□□□□ 0.35
BEST1O76090 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.22■□□□□ 0.35
BEST1O76090 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.22■□□□□ 0.35
BEST1O76090 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
BEST1O76090 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
BEST1O76090 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.21■□□□□ 0.35
BEST1O76090 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST1O76090 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
BEST1O76090 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
BEST1O76090 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
BEST1O76090 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.21■□□□□ 0.35
BEST1O76090 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
BEST1O76090 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.21■□□□□ 0.35
BEST1O76090 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.21■□□□□ 0.35
BEST1O76090 CNN2P2-201ENST00000443536 909 ntBASIC17.21■□□□□ 0.35
BEST1O76090 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.21■□□□□ 0.35
BEST1O76090 CNN2P3-201ENST00000450201 906 ntBASIC17.21■□□□□ 0.35
BEST1O76090 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.21■□□□□ 0.35
BEST1O76090 BANF1P1-201ENST00000553684 263 ntBASIC17.21■□□□□ 0.35
BEST1O76090 AL390955.2-201ENST00000603032 514 ntBASIC17.21■□□□□ 0.35
BEST1O76090 AL136317.3-201ENST00000618497 906 ntBASIC17.21■□□□□ 0.35
BEST1O76090 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
BEST1O76090 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.21■□□□□ 0.35
BEST1O76090 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
BEST1O76090 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
BEST1O76090 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
BEST1O76090 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.21■□□□□ 0.34
BEST1O76090 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
BEST1O76090 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.21■□□□□ 0.34
BEST1O76090 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.21■□□□□ 0.34
BEST1O76090 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST1O76090 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST1O76090 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 KLF2P3-201ENST00000451977 1087 ntBASIC17.2■□□□□ 0.34
BEST1O76090 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.2■□□□□ 0.34
BEST1O76090 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.2■□□□□ 0.34
BEST1O76090 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
BEST1O76090 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.2■□□□□ 0.34
BEST1O76090 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
BEST1O76090 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
BEST1O76090 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
BEST1O76090 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms