Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC11.12□□□□□ -0.63
SNCGO76070 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.12□□□□□ -0.63
SNCGO76070 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNCGO76070 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.12□□□□□ -0.63
SNCGO76070 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC11.12□□□□□ -0.63
SNCGO76070 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 AL109976.1-201ENST00000621919 5678 ntBASIC11.12□□□□□ -0.63
SNCGO76070 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNCGO76070 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 SLC45A4-203ENST00000519067 7483 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SNCGO76070 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC11.12□□□□□ -0.63
SNCGO76070 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC11.12□□□□□ -0.63
SNCGO76070 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SNCGO76070 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SNCGO76070 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SNCGO76070 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC11.11□□□□□ -0.63
SNCGO76070 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 KRT18P23-201ENST00000435622 1283 ntBASIC11.11□□□□□ -0.63
SNCGO76070 AL355355.2-201ENST00000442321 338 ntBASIC11.11□□□□□ -0.63
SNCGO76070 FAM207BP-201ENST00000447172 505 ntBASIC11.11□□□□□ -0.63
SNCGO76070 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.11□□□□□ -0.63
SNCGO76070 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC11.11□□□□□ -0.63
SNCGO76070 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 SOX15-203ENST00000570788 1093 ntBASIC11.11□□□□□ -0.63
SNCGO76070 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
SNCGO76070 MAZ-216ENST00000616501 991 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 AL050303.2-201ENST00000619798 666 ntBASIC11.11□□□□□ -0.63
SNCGO76070 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 AC092123.2-201ENST00000611189 5421 ntBASIC11.11□□□□□ -0.63
SNCGO76070 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 AC117489.1-201ENST00000625169 3217 ntBASIC11.11□□□□□ -0.63
SNCGO76070 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
SNCGO76070 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC11.11□□□□□ -0.63
SNCGO76070 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.11□□□□□ -0.63
SNCGO76070 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SNCGO76070 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms