Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 AC105917.1-201ENST00000506637 2539 ntBASIC15.42■□□□□ 0.06
TRIM3O75382 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM3O75382 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRIM3O75382 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.42■□□□□ 0.06
TRIM3O75382 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.42■□□□□ 0.06
TRIM3O75382 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.41■□□□□ 0.06
TRIM3O75382 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 AL353732.1-201ENST00000569618 1459 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 AL021920.2-201ENST00000624828 1351 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM3O75382 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM3O75382 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRIM3O75382 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM3O75382 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.41■□□□□ 0.06
TRIM3O75382 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 AC005829.1-201ENST00000570002 483 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 MIR4515-201ENST00000584082 81 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 AC055717.3-201ENST00000622967 595 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRIM3O75382 KRT8P49-201ENST00000604166 1432 ntBASIC15.41■□□□□ 0.06
TRIM3O75382 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRIM3O75382 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRIM3O75382 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 MKNK2P1-201ENST00000437526 628 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 ALG1L5P-201ENST00000482043 771 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 YBX1P5-201ENST00000509441 847 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 AP002490.2-201ENST00000524791 560 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 AL031432.2-201ENST00000566714 459 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 AL928711.1-201ENST00000570165 459 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 AC091167.2-201ENST00000579581 588 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 AC068137.2-201ENST00000605408 478 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 AC092053.1-201ENST00000605787 1936 ntBASIC15.4■□□□□ 0.06
TRIM3O75382 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.4■□□□□ 0.06
TRIM3O75382 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRIM3O75382 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.4■□□□□ 0.06
TRIM3O75382 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms