Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AL121832.2-201ENST00000610979 668 ntBASIC14.71□□□□□ -0.05
PFDN1O60925 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.71□□□□□ -0.05
PFDN1O60925 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
PFDN1O60925 AC004899.2-201ENST00000622993 3860 ntBASIC14.71□□□□□ -0.05
PFDN1O60925 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN1O60925 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN1O60925 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
PFDN1O60925 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
PFDN1O60925 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN1O60925 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.71□□□□□ -0.06
PFDN1O60925 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN1O60925 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.71□□□□□ -0.06
PFDN1O60925 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
PFDN1O60925 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
PFDN1O60925 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN1O60925 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 AC096631.2-201ENST00000436136 790 ntBASIC14.7□□□□□ -0.06
PFDN1O60925 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN1O60925 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN1O60925 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.7□□□□□ -0.06
PFDN1O60925 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
PFDN1O60925 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.7□□□□□ -0.06
PFDN1O60925 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.7□□□□□ -0.06
PFDN1O60925 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
PFDN1O60925 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.7□□□□□ -0.06
PFDN1O60925 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.69□□□□□ -0.06
PFDN1O60925 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.69□□□□□ -0.06
PFDN1O60925 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
PFDN1O60925 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 GPX1P1-201ENST00000388829 606 ntBASIC14.69□□□□□ -0.06
PFDN1O60925 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.69□□□□□ -0.06
PFDN1O60925 RPS2P52-201ENST00000469610 820 ntBASIC14.69□□□□□ -0.06
PFDN1O60925 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC14.69□□□□□ -0.06
PFDN1O60925 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.69□□□□□ -0.06
PFDN1O60925 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
PFDN1O60925 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
PFDN1O60925 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms