Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 AL355306.1-201ENST00000415580 579 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 AL671277.1-201ENST00000429656 993 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 AC093724.1-201ENST00000448659 1027 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 POU5F1P6-201ENST00000466990 990 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCA5O60264 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCA5O60264 AC010327.4-202ENST00000591484 748 ntBASIC20.3■□□□□ 0.84
SMARCA5O60264 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.3■□□□□ 0.84
SMARCA5O60264 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SMARCA5O60264 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.3■□□□□ 0.84
SMARCA5O60264 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SMARCA5O60264 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SMARCA5O60264 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.3■□□□□ 0.84
SMARCA5O60264 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMARCA5O60264 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC20.29■□□□□ 0.84
SMARCA5O60264 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SMARCA5O60264 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SMARCA5O60264 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCA5O60264 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SMARCA5O60264 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 HTR5BP-201ENST00000430851 1154 ntBASIC20.29■□□□□ 0.84
SMARCA5O60264 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.29■□□□□ 0.84
SMARCA5O60264 KRT8P48-201ENST00000515599 1220 ntBASIC20.29■□□□□ 0.84
SMARCA5O60264 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.29■□□□□ 0.84
SMARCA5O60264 AL135744.1-201ENST00000565098 629 ntBASIC20.29■□□□□ 0.84
SMARCA5O60264 RARRES2P8-201ENST00000566335 367 ntBASIC20.29■□□□□ 0.84
SMARCA5O60264 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.29■□□□□ 0.84
SMARCA5O60264 C20orf181-201ENST00000623918 480 ntBASIC20.29■□□□□ 0.84
SMARCA5O60264 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC20.29■□□□□ 0.84
SMARCA5O60264 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.29■□□□□ 0.84
SMARCA5O60264 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.29■□□□□ 0.84
SMARCA5O60264 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMARCA5O60264 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCA5O60264 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SMARCA5O60264 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCA5O60264 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 TFAMP1-201ENST00000412727 736 ntBASIC20.28■□□□□ 0.84
SMARCA5O60264 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.28■□□□□ 0.84
SMARCA5O60264 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.28■□□□□ 0.84
SMARCA5O60264 AL161645.1-201ENST00000622716 1255 ntBASIC20.28■□□□□ 0.84
SMARCA5O60264 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.28■□□□□ 0.84
SMARCA5O60264 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC20.28■□□□□ 0.84
SMARCA5O60264 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SMARCA5O60264 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
SMARCA5O60264 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SMARCA5O60264 SP100-205ENST00000409824 1802 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCA5O60264 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.27■□□□□ 0.84
SMARCA5O60264 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SMARCA5O60264 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms