Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
ACTN4O43707 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.47■□□□□ 0.55
ACTN4O43707 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.47■□□□□ 0.55
ACTN4O43707 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.47■□□□□ 0.55
ACTN4O43707 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.47■□□□□ 0.55
ACTN4O43707 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 LINC02447-202ENST00000501888 2146 ntBASIC18.47■□□□□ 0.55
ACTN4O43707 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.47■□□□□ 0.55
ACTN4O43707 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ACTN4O43707 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
ACTN4O43707 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 AC069224.1-201ENST00000566372 1715 ntBASIC18.46■□□□□ 0.55
ACTN4O43707 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC18.46■□□□□ 0.55
ACTN4O43707 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.46■□□□□ 0.55
ACTN4O43707 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.46■□□□□ 0.55
ACTN4O43707 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.46■□□□□ 0.55
ACTN4O43707 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.46■□□□□ 0.55
ACTN4O43707 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ACTN4O43707 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.46■□□□□ 0.55
ACTN4O43707 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
ACTN4O43707 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ACTN4O43707 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ACTN4O43707 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ACTN4O43707 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
ACTN4O43707 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.54
ACTN4O43707 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
ACTN4O43707 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ACTN4O43707 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 AC092919.2-201ENST00000623631 1645 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ACTN4O43707 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.45■□□□□ 0.54
ACTN4O43707 AC093909.1-201ENST00000504731 1122 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 AC109635.5-201ENST00000533593 962 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 AL662844.1-201ENST00000546340 181 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.45■□□□□ 0.54
ACTN4O43707 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ACTN4O43707 Z83851.2-201ENST00000609564 659 ntBASIC18.45■□□□□ 0.54
ACTN4O43707 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms