Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.58■□□□□ 0.24
SMAD6O43541 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMAD6O43541 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMAD6O43541 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SMAD6O43541 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.57■□□□□ 0.24
SMAD6O43541 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 TREML5P-201ENST00000421694 576 ntBASIC16.57■□□□□ 0.24
SMAD6O43541 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.57■□□□□ 0.24
SMAD6O43541 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.57■□□□□ 0.24
SMAD6O43541 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.57■□□□□ 0.24
SMAD6O43541 BANF1P1-201ENST00000553684 263 ntBASIC16.57■□□□□ 0.24
SMAD6O43541 AC140878.1-201ENST00000565277 250 ntBASIC16.57■□□□□ 0.24
SMAD6O43541 AC061975.2-201ENST00000581722 295 ntBASIC16.57■□□□□ 0.24
SMAD6O43541 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.57■□□□□ 0.24
SMAD6O43541 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.57■□□□□ 0.24
SMAD6O43541 AC007967.4-201ENST00000614700 386 ntBASIC16.57■□□□□ 0.24
SMAD6O43541 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMAD6O43541 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SMAD6O43541 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.57■□□□□ 0.24
SMAD6O43541 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SMAD6O43541 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD6O43541 AC055876.3-201ENST00000431496 288 ntBASIC16.56■□□□□ 0.24
SMAD6O43541 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD6O43541 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD6O43541 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.56■□□□□ 0.24
SMAD6O43541 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 AC138649.4-201ENST00000612222 287 ntBASIC16.56■□□□□ 0.24
SMAD6O43541 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.56■□□□□ 0.24
SMAD6O43541 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMAD6O43541 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SMAD6O43541 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD6O43541 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMAD6O43541 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD6O43541 U82695.1-201ENST00000635752 1889 ntBASIC16.55■□□□□ 0.24
SMAD6O43541 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD6O43541 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SMAD6O43541 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SMAD6O43541 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.55■□□□□ 0.24
SMAD6O43541 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.55■□□□□ 0.24
SMAD6O43541 POU5F1P6-201ENST00000466990 990 ntBASIC16.55■□□□□ 0.24
SMAD6O43541 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.55■□□□□ 0.24
SMAD6O43541 AC097493.3-201ENST00000509725 367 ntBASIC16.55■□□□□ 0.24
SMAD6O43541 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.55■□□□□ 0.24
SMAD6O43541 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms