Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.93□□□□□ -0.66
RTL8CO15255 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RTL8CO15255 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC10.93□□□□□ -0.66
RTL8CO15255 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC10.93□□□□□ -0.66
RTL8CO15255 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC10.93□□□□□ -0.66
RTL8CO15255 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC10.93□□□□□ -0.66
RTL8CO15255 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTL8CO15255 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
RTL8CO15255 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.92□□□□□ -0.66
RTL8CO15255 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC10.92□□□□□ -0.66
RTL8CO15255 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC10.92□□□□□ -0.66
RTL8CO15255 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
RTL8CO15255 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
RTL8CO15255 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC10.92□□□□□ -0.66
RTL8CO15255 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC10.92□□□□□ -0.66
RTL8CO15255 AL033527.4-201ENST00000641026 673 ntBASIC10.92□□□□□ -0.66
RTL8CO15255 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC10.92□□□□□ -0.66
RTL8CO15255 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC10.92□□□□□ -0.66
RTL8CO15255 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 NOC2LP2-201ENST00000407594 1944 ntBASIC10.92□□□□□ -0.66
RTL8CO15255 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.92□□□□□ -0.66
RTL8CO15255 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RTL8CO15255 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC10.91□□□□□ -0.66
RTL8CO15255 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.91□□□□□ -0.66
RTL8CO15255 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
RTL8CO15255 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
RTL8CO15255 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
RTL8CO15255 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms