Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CHL1O00533 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC20.99■□□□□ 0.95
CHL1O00533 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CHL1O00533 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 HTR7P1-202ENST00000624664 4411 ntBASIC20.99■□□□□ 0.95
CHL1O00533 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHL1O00533 AL139010.1-201ENST00000454878 894 ntBASIC20.99■□□□□ 0.95
CHL1O00533 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.99■□□□□ 0.95
CHL1O00533 IGHV3-42-201ENST00000520410 361 ntBASIC20.99■□□□□ 0.95
CHL1O00533 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC20.99■□□□□ 0.95
CHL1O00533 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.99■□□□□ 0.95
CHL1O00533 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.99■□□□□ 0.95
CHL1O00533 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.99■□□□□ 0.95
CHL1O00533 AC026979.3-201ENST00000607315 403 ntBASIC20.99■□□□□ 0.95
CHL1O00533 AL844908.2-201ENST00000609461 460 ntBASIC20.99■□□□□ 0.95
CHL1O00533 AJ011932.1-201ENST00000621707 465 ntBASIC20.99■□□□□ 0.95
CHL1O00533 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CHL1O00533 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.99■□□□□ 0.95
CHL1O00533 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.99■□□□□ 0.95
CHL1O00533 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.99■□□□□ 0.95
CHL1O00533 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHL1O00533 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.98■□□□□ 0.95
CHL1O00533 KRT8P12-202ENST00000472924 1397 ntBASIC20.98■□□□□ 0.95
CHL1O00533 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHL1O00533 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CHL1O00533 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHL1O00533 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHL1O00533 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CHL1O00533 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CHL1O00533 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHL1O00533 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
CHL1O00533 MIR661-201ENST00000384842 89 ntBASIC20.98■□□□□ 0.95
CHL1O00533 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC20.98■□□□□ 0.95
CHL1O00533 AC009477.1-201ENST00000452936 217 ntBASIC20.98■□□□□ 0.95
CHL1O00533 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC20.98■□□□□ 0.95
CHL1O00533 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC20.98■□□□□ 0.95
CHL1O00533 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 NAA60-208ENST00000570819 833 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CHL1O00533 AC087499.5-201ENST00000452760 1342 ntBASIC20.98■□□□□ 0.95
CHL1O00533 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.98■□□□□ 0.95
CHL1O00533 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.97■□□□□ 0.95
CHL1O00533 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 AL691432.1-201ENST00000596308 1422 ntBASIC20.97■□□□□ 0.95
CHL1O00533 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 RPS19-201ENST00000221975 500 ntTSL 3 BASIC20.97■□□□□ 0.95
CHL1O00533 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC20.97■□□□□ 0.95
CHL1O00533 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 FAM8A3P-201ENST00000427218 844 ntBASIC20.97■□□□□ 0.95
CHL1O00533 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC20.97■□□□□ 0.95
CHL1O00533 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.97■□□□□ 0.95
CHL1O00533 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 INGX-202ENST00000489074 768 ntBASIC20.97■□□□□ 0.95
CHL1O00533 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.97■□□□□ 0.95
CHL1O00533 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.97■□□□□ 0.95
CHL1O00533 AC009407.1-201ENST00000568958 598 ntBASIC20.97■□□□□ 0.95
CHL1O00533 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CHL1O00533 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.97■□□□□ 0.95
CHL1O00533 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC20.97■□□□□ 0.95
CHL1O00533 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CHL1O00533 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CHL1O00533 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.97■□□□□ 0.95
CHL1O00533 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC20.96■□□□□ 0.95
CHL1O00533 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CHL1O00533 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC20.96■□□□□ 0.95
CHL1O00533 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms