Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.3■□□□□ 0.2
TLR4O00206 AL353705.2-201ENST00000428243 662 ntBASIC16.3■□□□□ 0.2
TLR4O00206 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.3■□□□□ 0.2
TLR4O00206 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.3■□□□□ 0.2
TLR4O00206 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 HLA-V-204ENST00000476601 1289 ntBASIC16.3■□□□□ 0.2
TLR4O00206 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.3■□□□□ 0.2
TLR4O00206 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.3■□□□□ 0.2
TLR4O00206 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC16.3■□□□□ 0.2
TLR4O00206 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.3■□□□□ 0.2
TLR4O00206 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.3■□□□□ 0.2
TLR4O00206 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.3■□□□□ 0.2
TLR4O00206 AC009118.2-201ENST00000613275 655 ntBASIC16.3■□□□□ 0.2
TLR4O00206 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.3■□□□□ 0.2
TLR4O00206 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TLR4O00206 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TLR4O00206 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TLR4O00206 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
TLR4O00206 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TLR4O00206 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.29■□□□□ 0.2
TLR4O00206 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TLR4O00206 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR4O00206 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 FAM220BP-201ENST00000377689 816 ntBASIC16.29■□□□□ 0.2
TLR4O00206 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TLR4O00206 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR4O00206 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR4O00206 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.29■□□□□ 0.2
TLR4O00206 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.29■□□□□ 0.2
TLR4O00206 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TLR4O00206 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TLR4O00206 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 AC022144.1-201ENST00000602255 1580 ntBASIC16.29■□□□□ 0.2
TLR4O00206 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TLR4O00206 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TLR4O00206 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TLR4O00206 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.28■□□□□ 0.2
TLR4O00206 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.28■□□□□ 0.2
TLR4O00206 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.28■□□□□ 0.2
TLR4O00206 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.28■□□□□ 0.2
TLR4O00206 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.28■□□□□ 0.2
TLR4O00206 CRB3P1-201ENST00000449338 276 ntBASIC16.28■□□□□ 0.2
TLR4O00206 AC098859.1-201ENST00000502915 1238 ntBASIC16.28■□□□□ 0.2
TLR4O00206 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.28■□□□□ 0.2
TLR4O00206 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.28■□□□□ 0.2
TLR4O00206 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.28■□□□□ 0.2
TLR4O00206 COQ6-210ENST00000554920 649 ntTSL 3 BASIC16.28■□□□□ 0.2
TLR4O00206 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.28■□□□□ 0.2
TLR4O00206 AC027307.3-201ENST00000594262 1100 ntBASIC16.28■□□□□ 0.2
TLR4O00206 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TLR4O00206 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TLR4O00206 KRT8P39-201ENST00000396270 1433 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms