Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC005622.1-201ENST00000636801 1703 ntBASIC16.67■□□□□ 0.26
AP3B1O00203 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 AL365203.3-201ENST00000609742 2057 ntBASIC16.67■□□□□ 0.26
AP3B1O00203 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 RHOQP3-201ENST00000437982 621 ntBASIC16.67■□□□□ 0.26
AP3B1O00203 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3B1O00203 HCG4B-203ENST00000450128 991 ntBASIC16.67■□□□□ 0.26
AP3B1O00203 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3B1O00203 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 IGHV3-22-201ENST00000520721 359 ntBASIC16.67■□□□□ 0.26
AP3B1O00203 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3B1O00203 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.67■□□□□ 0.26
AP3B1O00203 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3B1O00203 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.67■□□□□ 0.26
AP3B1O00203 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.67■□□□□ 0.26
AP3B1O00203 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.67■□□□□ 0.26
AP3B1O00203 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
AP3B1O00203 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.67■□□□□ 0.26
AP3B1O00203 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
AP3B1O00203 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
AP3B1O00203 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.66■□□□□ 0.26
AP3B1O00203 RNA5SP415-201ENST00000517246 115 ntBASIC16.66■□□□□ 0.26
AP3B1O00203 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.66■□□□□ 0.26
AP3B1O00203 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3B1O00203 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3B1O00203 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.66■□□□□ 0.26
AP3B1O00203 AC023141.13-201ENST00000604991 943 ntBASIC16.66■□□□□ 0.26
AP3B1O00203 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.66■□□□□ 0.26
AP3B1O00203 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
AP3B1O00203 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3B1O00203 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 AC079328.2-201ENST00000561241 3354 ntBASIC16.65■□□□□ 0.26
AP3B1O00203 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
AP3B1O00203 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 PCDH8P1-201ENST00000428983 2773 ntBASIC16.65■□□□□ 0.26
AP3B1O00203 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.65■□□□□ 0.26
AP3B1O00203 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.65■□□□□ 0.26
AP3B1O00203 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
AP3B1O00203 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3B1O00203 AL049840.3-201ENST00000602669 611 ntBASIC16.65■□□□□ 0.26
AP3B1O00203 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.65■□□□□ 0.26
AP3B1O00203 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
AP3B1O00203 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms