Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PDLIM1O00151 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.77■□□□□ 0.11
PDLIM1O00151 KRT8P10-201ENST00000450021 1447 ntBASIC15.77■□□□□ 0.11
PDLIM1O00151 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.77■□□□□ 0.11
PDLIM1O00151 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PDLIM1O00151 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PDLIM1O00151 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM1O00151 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PDLIM1O00151 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM1O00151 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM1O00151 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.76■□□□□ 0.11
PDLIM1O00151 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.76■□□□□ 0.11
PDLIM1O00151 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.76■□□□□ 0.11
PDLIM1O00151 STK25P1-201ENST00000585406 838 ntBASIC15.76■□□□□ 0.11
PDLIM1O00151 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
PDLIM1O00151 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PDLIM1O00151 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.76■□□□□ 0.11
PDLIM1O00151 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PDLIM1O00151 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 NSUN5P1-202ENST00000421140 1535 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 NSUN5P2-203ENST00000457352 1529 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM1O00151 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 DUSP5P1-201ENST00000441325 1139 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM1O00151 AC104819.1-201ENST00000504587 486 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 AC074051.2-201ENST00000565115 352 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM1O00151 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 AL138831.2-201ENST00000606564 490 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
PDLIM1O00151 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.75■□□□□ 0.11
PDLIM1O00151 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.75■□□□□ 0.11
PDLIM1O00151 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
PDLIM1O00151 PRAL-201ENST00000624952 3286 ntBASIC15.75■□□□□ 0.11
PDLIM1O00151 AC125634.1-201ENST00000438758 1403 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms