Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.67■□□□□ 0.26
TBC1D3BA6NDS4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 SPTLC1P1-201ENST00000447199 261 ntBASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AC008738.7-201ENST00000609744 511 ntBASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.66■□□□□ 0.26
TBC1D3BA6NDS4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AL603756.1-201ENST00000606511 2163 ntBASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 GAPDHP21-201ENST00000450301 1010 ntBASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AL844908.2-201ENST00000609461 460 ntBASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 AC025048.6-201ENST00000634326 1161 ntBASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TBC1D3BA6NDS4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
TBC1D3BA6NDS4 AC006538.1-201ENST00000567905 1585 ntBASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 SPDYE22P-201ENST00000582158 798 ntBASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 AC026979.3-201ENST00000607315 403 ntBASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TBC1D3BA6NDS4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms