Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PALM3A6NDB9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PALM3A6NDB9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 CYMP-203ENST00000474680 1263 ntBASIC18.94■□□□□ 0.62
PALM3A6NDB9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PALM3A6NDB9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.94■□□□□ 0.62
PALM3A6NDB9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 BANF1P1-201ENST00000553684 263 ntBASIC18.93■□□□□ 0.62
PALM3A6NDB9 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 AC024267.1-201ENST00000582320 895 ntBASIC18.93■□□□□ 0.62
PALM3A6NDB9 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 AC106028.4-201ENST00000614509 607 ntBASIC18.93■□□□□ 0.62
PALM3A6NDB9 AC007967.4-201ENST00000614700 386 ntBASIC18.93■□□□□ 0.62
PALM3A6NDB9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PALM3A6NDB9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.93■□□□□ 0.62
PALM3A6NDB9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.92■□□□□ 0.62
PALM3A6NDB9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 FAM86GP-201ENST00000448322 971 ntBASIC18.92■□□□□ 0.62
PALM3A6NDB9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.92■□□□□ 0.62
PALM3A6NDB9 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PALM3A6NDB9 AC067863.1-201ENST00000494933 530 ntBASIC18.92■□□□□ 0.62
PALM3A6NDB9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.92■□□□□ 0.62
PALM3A6NDB9 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms