Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AL020989.1-201ENST00000422979 469 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 SIGLEC30P-201ENST00000455569 941 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 TPSP2-201ENST00000561760 610 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 BNIP3P18-201ENST00000593976 575 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AC116407.4-201ENST00000623319 1061 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AL359258.3-201ENST00000622910 2331 ntBASIC17.94■□□□□ 0.46
CCDC66A2RUB6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC66A2RUB6 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 AL137784.3-201ENST00000623858 2288 ntBASIC17.93■□□□□ 0.46
CCDC66A2RUB6 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 KRT17P6-201ENST00000453795 1220 ntBASIC17.93■□□□□ 0.46
CCDC66A2RUB6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 AC096582.2-201ENST00000510860 516 ntBASIC17.93■□□□□ 0.46
CCDC66A2RUB6 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 NSUN5P1-202ENST00000421140 1535 ntBASIC17.93■□□□□ 0.46
CCDC66A2RUB6 NSUN5P2-203ENST00000457352 1529 ntBASIC17.93■□□□□ 0.46
CCDC66A2RUB6 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC66A2RUB6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 AL645728.1-201ENST00000366221 2101 ntBASIC17.92■□□□□ 0.46
CCDC66A2RUB6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 RCN1P2-201ENST00000398357 915 ntBASIC17.92■□□□□ 0.46
CCDC66A2RUB6 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 AP000867.4-201ENST00000641616 219 ntBASIC17.92■□□□□ 0.46
CCDC66A2RUB6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC66A2RUB6 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms