Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL139288.1-201ENST00000623748 933 ntBASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 AC243591.1-201ENST00000452967 1364 ntBASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RNF103-CHMP3A0A140T963 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 AL590787.1-201ENST00000568856 1315 ntBASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 HCG4P8-203ENST00000443049 980 ntBASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 PRYP5-201ENST00000451909 266 ntBASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 MIR3652-201ENST00000579335 131 ntBASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF103-CHMP3A0A140T963 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
RNF103-CHMP3A0A140T963 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 NKAPP1-205ENST00000585790 367 ntBASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 AC064862.7-201ENST00000604520 867 ntBASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 AC126177.1-201ENST00000547829 2218 ntBASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF103-CHMP3A0A140T963 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 TERC-201ENST00000602385 541 ntBASIC15.94■□□□□ 0.14
RNF103-CHMP3A0A140T963 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms