Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 RHOQP3-201ENST00000437982 621 ntBASIC18.82■□□□□ 0.6
CLIC4Q9Y696 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 AC021097.1-201ENST00000607902 574 ntBASIC18.82■□□□□ 0.6
CLIC4Q9Y696 AL592424.1-201ENST00000563624 1536 ntBASIC18.82■□□□□ 0.6
CLIC4Q9Y696 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 CDC14C-201ENST00000428251 1719 ntBASIC18.82■□□□□ 0.6
CLIC4Q9Y696 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CLIC4Q9Y696 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 AC093909.1-201ENST00000504731 1122 ntBASIC18.81■□□□□ 0.6
CLIC4Q9Y696 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 AC096734.2-201ENST00000562054 433 ntBASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 AC112504.1-201ENST00000623415 1841 ntBASIC18.81■□□□□ 0.6
CLIC4Q9Y696 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLIC4Q9Y696 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 PMS2P4-201ENST00000412466 1052 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 AL662844.1-201ENST00000546340 181 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 MIR3909-201ENST00000579518 119 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 Z83851.2-201ENST00000609564 659 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 LINC02447-202ENST00000501888 2146 ntBASIC18.8■□□□□ 0.6
CLIC4Q9Y696 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CLIC4Q9Y696 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms