Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 PCGF3-213ENST00000620529 1899 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ME2P1-201ENST00000426028 1970 ntBASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PCDHB13Q9Y5F0 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 MCCD1P2-201ENST00000423228 335 ntBASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AC004832.2-201ENST00000426397 482 ntBASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AC090079.2-201ENST00000575289 768 ntBASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCDHB13Q9Y5F0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCDHB13Q9Y5F0 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 MTDHP5-201ENST00000598980 586 ntBASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB13Q9Y5F0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms