Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 AL031055.1-201ENST00000606362 631 ntBASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RPH3AQ9Y2J0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 RNU1-129P-201ENST00000384064 167 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AC002056.1-201ENST00000395613 760 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 U1.21-201ENST00000580816 167 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AC092902.6-201ENST00000641783 218 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AL603756.1-201ENST00000606511 2163 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 UBALD1-205ENST00000590891 2641 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 LINC00895-201ENST00000629028 1637 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 AC078925.2-201ENST00000624013 1973 ntBASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RPH3AQ9Y2J0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms