Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HHLA3Q9XRX5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 HLA-A-202ENST00000376806 1854 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AL009178.2-201ENST00000597278 2719 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 ALOX12P2-203ENST00000570921 1945 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AC139887.3-201ENST00000568585 713 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AC064862.7-201ENST00000604520 867 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AC013268.4-201ENST00000637413 2228 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AC006538.1-201ENST00000567905 1585 ntBASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HHLA3Q9XRX5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AF238378.1-201ENST00000526806 358 ntBASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 SART3-203ENST00000546611 1184 ntBASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AL691432.3-201ENST00000621860 400 ntBASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.11□□□□□ -0.47
HHLA3Q9XRX5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms