Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 MIR346-201ENST00000362234 95 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 SEPHS1P7-201ENST00000452995 1177 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC087163.2-201ENST00000457299 853 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AL009183.1-201ENST00000603760 355 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC090953.1-201ENST00000604305 1092 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 PRORSD1P-202ENST00000563365 2154 ntBASIC15.67■□□□□ 0.1
LHX6Q9UPM6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LHX6Q9UPM6 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 TMEM14DP-201ENST00000422205 345 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC019227.1-201ENST00000526902 510 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC097478.2-201ENST00000610572 514 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC084782.3-201ENST00000612282 578 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 WASH6P-202ENST00000359512 1437 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 AC006538.1-201ENST00000567905 1585 ntBASIC15.66■□□□□ 0.1
LHX6Q9UPM6 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
LHX6Q9UPM6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LHX6Q9UPM6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.65■□□□□ 0.1
LHX6Q9UPM6 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LHX6Q9UPM6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LHX6Q9UPM6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LHX6Q9UPM6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms