Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 BANF1P1-201ENST00000553684 263 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC023310.3-201ENST00000557027 670 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC100756.1-201ENST00000562736 682 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC138749.3-201ENST00000567691 622 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC116165.1-201ENST00000611806 668 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 WFDC1-204ENST00000613603 549 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 AL033527.5-201ENST00000641382 801 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 REXO1L11P-201ENST00000620964 1927 ntBASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NCDNQ9UBB6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 CTBP2P5-201ENST00000454986 1264 ntBASIC16.3■□□□□ 0.2
NCDNQ9UBB6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 RN7SL190P-201ENST00000582519 257 ntBASIC16.3■□□□□ 0.2
NCDNQ9UBB6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NCDNQ9UBB6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 TUBB1P2-201ENST00000422712 1306 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 TUBB1P1-201ENST00000503144 1300 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 GOLGA2P4-201ENST00000441462 777 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 KLF2P4-201ENST00000451959 1225 ntBASIC16.29■□□□□ 0.2
NCDNQ9UBB6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.29■□□□□ 0.2
NCDNQ9UBB6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 257 ms