Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CUEDC1Q9NWM3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 C20orf181-201ENST00000623918 480 ntBASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.97■□□□□ 0.15
CUEDC1Q9NWM3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 MKNK2P1-201ENST00000437526 628 ntBASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 SPCS2P1-201ENST00000561636 679 ntBASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CUEDC1Q9NWM3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 MST1L-201ENST00000442552 2185 ntBASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CUEDC1Q9NWM3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 AL162727.3-201ENST00000635661 2787 ntBASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.95■□□□□ 0.14
CUEDC1Q9NWM3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms