Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PGGT1BP1-201ENST00000455321 1023 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 GYG1P1-201ENST00000460864 698 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 THAP6-210ENST00000507557 542 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 OR8K2P-201ENST00000524645 927 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC106730.1-201ENST00000566722 1090 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 AC069234.5-201ENST00000611056 416 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 LINC00602-201ENST00000629776 2065 ntBASIC19.54■□□□□ 0.72
RNF216Q9NWF9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF216Q9NWF9 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 RNU6-304P-201ENST00000364855 107 ntBASIC19.53■□□□□ 0.72
RNF216Q9NWF9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC020699.1-201ENST00000505161 445 ntBASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC103982.1-201ENST00000561358 571 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC011773.4-201ENST00000562577 487 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC139099.1-203ENST00000570366 607 ntTSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC012213.4-201ENST00000606457 354 ntBASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 AC016911.1-201ENST00000613297 452 ntBASIC19.53■□□□□ 0.72
RNF216Q9NWF9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 PP12613-201ENST00000424958 2230 ntBASIC19.53■□□□□ 0.72
RNF216Q9NWF9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
RNF216Q9NWF9 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 ARL14-201ENST00000320767 1294 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 KRT18P13-201ENST00000400056 1290 ntBASIC19.52■□□□□ 0.72
RNF216Q9NWF9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 DPPA2P1-201ENST00000428060 556 ntBASIC19.52■□□□□ 0.72
RNF216Q9NWF9 MTCYBP31-201ENST00000438855 1122 ntBASIC19.52■□□□□ 0.72
RNF216Q9NWF9 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 LINC01304-203ENST00000453880 812 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 ZRANB2-AS2-205ENST00000455406 783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 SEPT7P6-201ENST00000469999 1143 ntBASIC19.52■□□□□ 0.72
RNF216Q9NWF9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 LINC01099-202ENST00000512527 578 ntTSL 2 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.52■□□□□ 0.72
RNF216Q9NWF9 AC007346.1-202ENST00000602826 684 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms