Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SALL1Q9NSC2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.72■□□□□ 0.75
SALL1Q9NSC2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 SPDYE17-201ENST00000412399 783 ntBASIC19.72■□□□□ 0.75
SALL1Q9NSC2 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 AF228730.6-201ENST00000641497 218 ntBASIC19.72■□□□□ 0.75
SALL1Q9NSC2 AC084121.3-201ENST00000641716 218 ntBASIC19.72■□□□□ 0.75
SALL1Q9NSC2 AC105233.6-201ENST00000642093 218 ntBASIC19.72■□□□□ 0.75
SALL1Q9NSC2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.72■□□□□ 0.75
SALL1Q9NSC2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.71■□□□□ 0.75
SALL1Q9NSC2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 SPTLC1P1-201ENST00000447199 261 ntBASIC19.71■□□□□ 0.75
SALL1Q9NSC2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 AC008738.7-201ENST00000609744 511 ntBASIC19.71■□□□□ 0.75
SALL1Q9NSC2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SALL1Q9NSC2 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 CRB3P1-201ENST00000449338 276 ntBASIC19.7■□□□□ 0.74
SALL1Q9NSC2 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.7■□□□□ 0.74
SALL1Q9NSC2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SALL1Q9NSC2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SALL1Q9NSC2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms