Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.64■□□□□ 0.41
SIX2Q9NPC8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.64■□□□□ 0.41
SIX2Q9NPC8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.64■□□□□ 0.41
SIX2Q9NPC8 AC138932.1-201ENST00000534164 6830 ntBASIC17.64■□□□□ 0.41
SIX2Q9NPC8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.63■□□□□ 0.41
SIX2Q9NPC8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ZNF259P1-201ENST00000407656 1365 ntBASIC17.63■□□□□ 0.41
SIX2Q9NPC8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 WASH6P-202ENST00000359512 1437 ntBASIC17.63■□□□□ 0.41
SIX2Q9NPC8 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIX2Q9NPC8 AP005117.1-202ENST00000581724 1908 ntBASIC17.62■□□□□ 0.41
SIX2Q9NPC8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 AL139384.1-201ENST00000612143 3047 ntBASIC17.62■□□□□ 0.41
SIX2Q9NPC8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 AC026396.1-201ENST00000419388 421 ntBASIC17.62■□□□□ 0.41
SIX2Q9NPC8 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIX2Q9NPC8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms