Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 LINC00265-3P-201ENST00000447588 903 ntBASIC16.37■□□□□ 0.21
SSU72Q9NP77 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 LINC01023-201ENST00000606054 436 ntBASIC16.37■□□□□ 0.21
SSU72Q9NP77 AL139288.1-201ENST00000623748 933 ntBASIC16.37■□□□□ 0.21
SSU72Q9NP77 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.37■□□□□ 0.21
SSU72Q9NP77 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 AC068418.2-201ENST00000577309 3703 ntBASIC16.37■□□□□ 0.21
SSU72Q9NP77 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SSU72Q9NP77 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SSU72Q9NP77 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.36■□□□□ 0.21
SSU72Q9NP77 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 AC106795.1-205ENST00000512851 1056 ntBASIC16.36■□□□□ 0.21
SSU72Q9NP77 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 AP001269.4-201ENST00000609611 512 ntBASIC16.36■□□□□ 0.21
SSU72Q9NP77 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 LINC02228-204ENST00000642115 2962 ntBASIC16.36■□□□□ 0.21
SSU72Q9NP77 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SSU72Q9NP77 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
SSU72Q9NP77 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.36■□□□□ 0.21
SSU72Q9NP77 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AL031133.1-201ENST00000406807 723 ntBASIC16.35■□□□□ 0.21
SSU72Q9NP77 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AC104819.1-201ENST00000504587 486 ntBASIC16.35■□□□□ 0.21
SSU72Q9NP77 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 AL136379.1-201ENST00000623471 2642 ntBASIC16.35■□□□□ 0.21
SSU72Q9NP77 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.35■□□□□ 0.21
SSU72Q9NP77 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
SSU72Q9NP77 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms