Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC092384.3-202ENST00000564646 2873 ntBASIC17.41■□□□□ 0.38
CD248Q9HCU0 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 FAM185BP-201ENST00000443595 716 ntBASIC17.41■□□□□ 0.38
CD248Q9HCU0 CXCL1P1-201ENST00000502804 216 ntBASIC17.41■□□□□ 0.38
CD248Q9HCU0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.41■□□□□ 0.38
CD248Q9HCU0 CYP2T1P-202ENST00000641596 2535 ntBASIC17.41■□□□□ 0.38
CD248Q9HCU0 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CD248Q9HCU0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 CYMP-203ENST00000474680 1263 ntBASIC17.4■□□□□ 0.38
CD248Q9HCU0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 AC023141.13-201ENST00000604991 943 ntBASIC17.4■□□□□ 0.38
CD248Q9HCU0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 ACTL9-202ENST00000612068 1252 ntBASIC17.4■□□□□ 0.38
CD248Q9HCU0 AC092902.6-201ENST00000641783 218 ntBASIC17.4■□□□□ 0.38
CD248Q9HCU0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CD248Q9HCU0 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.4■□□□□ 0.38
CD248Q9HCU0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CD248Q9HCU0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD248Q9HCU0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD248Q9HCU0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.39■□□□□ 0.38
CD248Q9HCU0 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD248Q9HCU0 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CD248Q9HCU0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 FAM58CP-201ENST00000435741 640 ntBASIC17.39■□□□□ 0.37
CD248Q9HCU0 ACTG1P14-201ENST00000446382 1122 ntBASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC091812.2-201ENST00000619081 385 ntBASIC17.39■□□□□ 0.37
CD248Q9HCU0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CD248Q9HCU0 AC046185.3-201ENST00000623228 1824 ntBASIC17.39■□□□□ 0.37
CD248Q9HCU0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CD248Q9HCU0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms