Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 TEX28P1-201ENST00000613479 1221 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 TEX28P2-201ENST00000617764 1221 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 FLJ38576-201ENST00000623820 2459 ntBASIC17.72■□□□□ 0.43
NXF3Q9H4D5 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NXF3Q9H4D5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.71■□□□□ 0.43
NXF3Q9H4D5 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 LINC01144-201ENST00000626198 1710 ntBASIC17.71■□□□□ 0.43
NXF3Q9H4D5 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 AC011676.5-201ENST00000624864 2660 ntBASIC17.71■□□□□ 0.43
NXF3Q9H4D5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NXF3Q9H4D5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NXF3Q9H4D5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.71■□□□□ 0.42
NXF3Q9H4D5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AL080243.2-201ENST00000418783 582 ntBASIC17.7■□□□□ 0.42
NXF3Q9H4D5 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC024267.1-201ENST00000582320 895 ntBASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.7■□□□□ 0.42
NXF3Q9H4D5 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NXF3Q9H4D5 AC005052.1-201ENST00000625181 2492 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms