Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 RN7SL589P-201ENST00000481268 310 ntBASIC17.36■□□□□ 0.37
LHX5Q9H2C1 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 SNHG9-202ENST00000564014 471 ntBASIC17.36■□□□□ 0.37
LHX5Q9H2C1 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LHX5Q9H2C1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AC243562.1-201ENST00000560672 389 ntBASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AL138918.1-201ENST00000568306 659 ntBASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AC008267.7-201ENST00000624570 1194 ntBASIC17.35■□□□□ 0.37
LHX5Q9H2C1 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 AL589702.1-201ENST00000641229 1509 ntBASIC17.35■□□□□ 0.37
LHX5Q9H2C1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LHX5Q9H2C1 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC079328.2-201ENST00000561241 3354 ntBASIC17.34■□□□□ 0.37
LHX5Q9H2C1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.34■□□□□ 0.37
LHX5Q9H2C1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms