Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 AC007967.2-201ENST00000432613 625 ntBASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 PAWRP1-201ENST00000451083 565 ntBASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 KRT18P3-201ENST00000451602 1288 ntBASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 AC010327.4-202ENST00000591484 748 ntBASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 AL691403.2-201ENST00000618460 490 ntBASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
FOXP3Q9BZS1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 FER1L4-210ENST00000615531 5998 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AC132872.4-202ENST00000622924 2756 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AL591424.1-201ENST00000442569 1213 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 UNC93B6-202ENST00000528242 690 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AC055717.3-201ENST00000622967 595 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
FOXP3Q9BZS1 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 AC011270.2-201ENST00000624293 2550 ntBASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 PCGF3-213ENST00000620529 1899 ntBASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 LAGE3P1-201ENST00000425356 484 ntBASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
FOXP3Q9BZS1 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms