Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 GAPDHP21-201ENST00000450301 1010 ntBASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AC004840.1-201ENST00000636359 365 ntBASIC17.12■□□□□ 0.33
LRRC3Q9BY71 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.12■□□□□ 0.33
LRRC3Q9BY71 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 AC025048.6-201ENST00000634326 1161 ntBASIC17.11■□□□□ 0.33
LRRC3Q9BY71 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LRRC3Q9BY71 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRRC3Q9BY71 ZNF890P-202ENST00000530367 1156 ntBASIC17.1■□□□□ 0.33
LRRC3Q9BY71 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms