Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 CYP2T1P-202ENST00000641596 2535 ntBASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.96■□□□□ 0.79
RPAP1Q9BWH6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 AC236430.1-201ENST00000402231 743 ntBASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 TERF1P3-201ENST00000505638 1227 ntBASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 AL390754.1-201ENST00000619088 582 ntBASIC19.95■□□□□ 0.79
RPAP1Q9BWH6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 ALOX12P2-203ENST00000570921 1945 ntBASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 AL671710.1-201ENST00000610245 2349 ntBASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 UGT1A2P-201ENST00000454886 866 ntBASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 AC069120.2-201ENST00000524091 540 ntBASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 RN7SL204P-201ENST00000582831 262 ntBASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.95■□□□□ 0.78
RPAP1Q9BWH6 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 GGT4P-201ENST00000623672 1708 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AL512652.2-201ENST00000625156 1716 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 GGT3P-204ENST00000453783 1664 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC016027.1-202ENST00000607927 1699 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC092364.2-201ENST00000596710 2692 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms