Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF4Q9BSR8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF4Q9BSR8 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
YIPF4Q9BSR8 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 GGT4P-201ENST00000623672 1708 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 RNA5SP415-201ENST00000517246 115 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 AC010654.1-201ENST00000615722 808 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 AP001350.2-201ENST00000625104 1094 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 MST1L-201ENST00000442552 2185 ntBASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
YIPF4Q9BSR8 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 PCDHA1-201ENST00000378133 2726 ntBASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 ACTL9-202ENST00000612068 1252 ntBASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AC012569.1-201ENST00000591191 1524 ntBASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
YIPF4Q9BSR8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 AC009947.1-201ENST00000444350 727 ntBASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 AL513480.1-201ENST00000451731 511 ntBASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.56■□□□□ 0.08
YIPF4Q9BSR8 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms