Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 PRSS29P-201ENST00000440800 595 ntBASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.07■□□□□ 0.32
HERPUD2Q9BSE4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 VN2R19P-201ENST00000442399 1052 ntBASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 HCG4B-203ENST00000450128 991 ntBASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 IGHV3-22-201ENST00000520721 359 ntBASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 AC010507.1-201ENST00000633895 436 ntBASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 PRAL-201ENST00000624952 3286 ntBASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HERPUD2Q9BSE4 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 ZNF259P1-201ENST00000407656 1365 ntBASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 AL513480.1-201ENST00000451731 511 ntBASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 RNA5SP415-201ENST00000517246 115 ntBASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 SLC25A1P1-201ENST00000528351 927 ntBASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HERPUD2Q9BSE4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms