Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
NDNQ99608 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
NDNQ99608 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.6■□□□□ 0.25
NDNQ99608 AL450487.1-201ENST00000426799 995 ntBASIC16.6■□□□□ 0.25
NDNQ99608 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.6■□□□□ 0.25
NDNQ99608 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.6■□□□□ 0.25
NDNQ99608 AC005593.1-201ENST00000624894 515 ntBASIC16.6■□□□□ 0.25
NDNQ99608 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.6■□□□□ 0.25
NDNQ99608 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.6■□□□□ 0.25
NDNQ99608 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.6■□□□□ 0.25
NDNQ99608 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NDNQ99608 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 AC004870.1-201ENST00000315132 882 ntBASIC16.59■□□□□ 0.25
NDNQ99608 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 AC108073.2-201ENST00000464002 357 ntBASIC16.59■□□□□ 0.25
NDNQ99608 AC092910.1-201ENST00000482027 1129 ntBASIC16.59■□□□□ 0.25
NDNQ99608 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
NDNQ99608 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.59■□□□□ 0.25
NDNQ99608 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.59■□□□□ 0.25
NDNQ99608 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 OR7E47P-204ENST00000575924 449 ntBASIC16.59■□□□□ 0.25
NDNQ99608 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.59■□□□□ 0.25
NDNQ99608 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.59■□□□□ 0.25
NDNQ99608 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 AC004790.2-201ENST00000623588 572 ntBASIC16.59■□□□□ 0.25
NDNQ99608 AC117500.6-201ENST00000624871 588 ntBASIC16.59■□□□□ 0.25
NDNQ99608 PAUPAR-201ENST00000630360 2965 ntBASIC16.59■□□□□ 0.25
NDNQ99608 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NDNQ99608 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.59■□□□□ 0.25
NDNQ99608 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.59■□□□□ 0.25
NDNQ99608 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.58■□□□□ 0.25
NDNQ99608 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.58■□□□□ 0.25
NDNQ99608 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NDNQ99608 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.58■□□□□ 0.24
NDNQ99608 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms