Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC211486.1-202ENST00000416371 468 ntBASIC17.07■□□□□ 0.32
HAPLN3Q96S86 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 AC211476.1-201ENST00000503899 468 ntBASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 KRT8P48-201ENST00000515599 1220 ntBASIC17.07■□□□□ 0.32
HAPLN3Q96S86 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 AC008267.7-201ENST00000624570 1194 ntBASIC17.07■□□□□ 0.32
HAPLN3Q96S86 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HAPLN3Q96S86 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 TIMM8BP1-201ENST00000452384 211 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC079140.1-201ENST00000508039 487 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC073389.1-201ENST00000595595 795 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC055717.3-201ENST00000622967 595 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AL513210.1-201ENST00000629608 234 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC073439.1-201ENST00000624121 1774 ntBASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.06■□□□□ 0.32
HAPLN3Q96S86 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 MIR1233-2-201ENST00000408138 82 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 MIR1233-1-201ENST00000408722 82 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AC093724.1-201ENST00000448659 1027 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 PRYP6-201ENST00000514804 343 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 KRT8P23-201ENST00000560090 1207 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 LINC01225-203ENST00000563550 1244 ntBASIC17.05■□□□□ 0.32
HAPLN3Q96S86 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
HAPLN3Q96S86 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms