Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 AC002347.1-201ENST00000569543 541 ntBASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CSPG4P5Q96PW8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 AC073439.1-201ENST00000624121 1774 ntBASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 MCCD1P2-201ENST00000423228 335 ntBASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 U82695.1-201ENST00000635752 1889 ntBASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSPG4P5Q96PW8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 FAM58CP-201ENST00000435741 640 ntBASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 AC092902.6-201ENST00000641783 218 ntBASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSPG4P5Q96PW8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CSPG4P5Q96PW8 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.96■□□□□ 0.3
CSPG4P5Q96PW8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.96■□□□□ 0.3
CSPG4P5Q96PW8 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
CSPG4P5Q96PW8 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms