Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ANKRD20A18P-201ENST00000359341 492 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AC111152.3-201ENST00000569699 673 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 GPR32P1-201ENST00000601788 811 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AL031432.5-201ENST00000641059 760 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AC097374.2-201ENST00000618617 1306 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 FAM45BP-202ENST00000592932 1624 ntBASIC12.55□□□□□ -0.4
AP1S3Q96PC3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.55□□□□□ -0.4
AP1S3Q96PC3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 C5AR2-201ENST00000595464 6746 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC104581.4-201ENST00000623126 3052 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC092068.3-201ENST00000587894 2016 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC006449.5-201ENST00000610658 2098 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 HLA-F-220ENST00000434407 884 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC079602.3-201ENST00000623931 403 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AL023973.1-201ENST00000624619 620 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AP006294.2-201ENST00000641667 209 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 RNF216P1-203ENST00000404404 2427 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AC131212.3-201ENST00000624087 4219 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 KRT18P22-201ENST00000402024 1347 ntBASIC12.54□□□□□ -0.4
AP1S3Q96PC3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.54□□□□□ -0.4
AP1S3Q96PC3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms