Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 TSEN15P1-201ENST00000423257 515 ntBASIC16.98■□□□□ 0.31
RPRD1AQ96P16 FAM58DP-201ENST00000428076 619 ntBASIC16.98■□□□□ 0.31
RPRD1AQ96P16 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SLC25A39P2-201ENST00000537614 270 ntBASIC16.98■□□□□ 0.31
RPRD1AQ96P16 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 AC009093.7-201ENST00000623853 1223 ntBASIC16.98■□□□□ 0.31
RPRD1AQ96P16 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RPRD1AQ96P16 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 LINC01144-201ENST00000626198 1710 ntBASIC16.97■□□□□ 0.31
RPRD1AQ96P16 MIR346-201ENST00000362234 95 ntBASIC16.97■□□□□ 0.31
RPRD1AQ96P16 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 METTL21AP1-201ENST00000438852 635 ntBASIC16.97■□□□□ 0.31
RPRD1AQ96P16 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.97■□□□□ 0.31
RPRD1AQ96P16 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 AC073389.1-201ENST00000595595 795 ntBASIC16.96■□□□□ 0.31
RPRD1AQ96P16 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.96■□□□□ 0.31
RPRD1AQ96P16 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RPRD1AQ96P16 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms