Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMARCD1Q96GM5 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 TUBB3P1-201ENST00000405796 1332 ntBASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 AC024267.1-201ENST00000582320 895 ntBASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 ME2P1-201ENST00000426028 1970 ntBASIC17.28■□□□□ 0.36
SMARCD1Q96GM5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 ALOX12P2-203ENST00000570921 1945 ntBASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 KLF2P3-201ENST00000451977 1087 ntBASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 AC125807.1-201ENST00000483097 614 ntBASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 AC051619.7-201ENST00000568314 623 ntBASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMARCD1Q96GM5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
SMARCD1Q96GM5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AL353705.2-201ENST00000428243 662 ntBASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 MIR4453-201ENST00000584019 89 ntBASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.26■□□□□ 0.35
SMARCD1Q96GM5 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms