Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AC007326.2-201ENST00000624224 7579 ntBASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 AL671710.1-201ENST00000610245 2349 ntBASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
FOXRED1Q96CU9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 AL512652.2-201ENST00000625156 1716 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TSPY19P-201ENST00000418461 509 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TSPY18P-201ENST00000441642 509 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 KRT18P31-201ENST00000506277 1292 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 MPDU1-223ENST00000582151 728 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 AL031731.1-201ENST00000642131 2094 ntBASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
FOXRED1Q96CU9 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 SNX33P1-201ENST00000592116 1762 ntBASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
FOXRED1Q96CU9 AC012313.10-201ENST00000623509 926 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms