Protein–RNA interactions for Protein: Q95460

MR1, Major histocompatibility complex class I-related gene protein, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MR1Q95460 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 MIR661-201ENST00000384842 89 ntBASIC15.51■□□□□ 0.07
MR1Q95460 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.51■□□□□ 0.07
MR1Q95460 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.51■□□□□ 0.07
MR1Q95460 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.51■□□□□ 0.07
MR1Q95460 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.51■□□□□ 0.07
MR1Q95460 AL139011.1-202ENST00000642063 584 ntBASIC15.51■□□□□ 0.07
MR1Q95460 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.51■□□□□ 0.07
MR1Q95460 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
MR1Q95460 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 AC060834.1-201ENST00000443027 2032 ntBASIC15.51■□□□□ 0.07
MR1Q95460 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MR1Q95460 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MR1Q95460 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MR1Q95460 AL645728.1-201ENST00000366221 2101 ntBASIC15.5■□□□□ 0.07
MR1Q95460 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC15.5■□□□□ 0.07
MR1Q95460 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
MR1Q95460 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.5■□□□□ 0.07
MR1Q95460 AC004890.2-204ENST00000481968 304 ntBASIC15.5■□□□□ 0.07
MR1Q95460 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.5■□□□□ 0.07
MR1Q95460 AC020765.3-201ENST00000613051 740 ntBASIC15.5■□□□□ 0.07
MR1Q95460 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.5■□□□□ 0.07
MR1Q95460 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
MR1Q95460 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.5■□□□□ 0.07
MR1Q95460 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.5■□□□□ 0.07
MR1Q95460 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.5■□□□□ 0.07
MR1Q95460 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MR1Q95460 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MR1Q95460 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.49■□□□□ 0.07
MR1Q95460 CETN4P-206ENST00000642099 2168 ntBASIC15.49■□□□□ 0.07
MR1Q95460 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.49■□□□□ 0.07
MR1Q95460 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MR1Q95460 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms